Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis macrogoltabida |
| Strain | strain EY-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingopyxis macrogoltabida strain EY-1 isolate activated sludge
Gene Summary
Adenine Count
6284 bp
Thymine Count
6457 bp
Guanine Count
10628 bp
Cytosine Count
11105 bp
Genome Length
34474 bp
Protein-coding Genes
41 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dutp diphosphatase | AN936_RS19830 | Q00185 | Positive | 4278188 - 4279579 | 51560.2 |
| p-type conjugative transfer protein trbj | AN936_RS19835 | Not Available | Positive | 4279957 - 4280739 | 28179.4 |
| putative entry exclusion protein trbk-alt | AN936_RS19840 | Not Available | Positive | 4280760 - 4281047 | 10206.2 |
| p-type conjugative transfer protein trbl | AN936_RS19845 | Not Available | Positive | 4281051 - 4282418 | 44666.0 |
| conjugal transfer protein trbf | AN936_RS19850 | Not Available | Positive | 4282415 - 4283104 | 25718.4 |
| p-type conjugative transfer protein trbg | AN936_RS19855 | Not Available | Positive | 4283101 - 4284087 | 35532.4 |
| trbi/virb10 family protein | AN936_RS19860 | Not Available | Positive | 4284084 - 4285217 | 40278.2 |
| duf2274 domain-containing protein | AN936_RS19865 | Not Available | Positive | 4285220 - 4285441 | 8043.95 |
| whg domain-containing protein | AN936_RS19870 | Not Available | Negative | 4285436 - 4285837 | 14860.7 |
| is1380-like element ispme1 family transposase | AN936_RS19875 | Not Available | Positive | 4285836 - 4287191 | 51097.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
