Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis macrogoltabida |
| Strain | strain EY-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingopyxis macrogoltabida strain EY-1 isolate activated sludge
Gene Summary
Adenine Count
6284 bp
Thymine Count
6457 bp
Guanine Count
10628 bp
Cytosine Count
11105 bp
Genome Length
34474 bp
Protein-coding Genes
41 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-keto-4-pentenoate hydratase | AN936_RS19155 | Not Available | Negative | 4129454 - 4130239 | 27282.8 |
| laci family dna-binding transcriptional regulator | AN936_RS19160 | Not Available | Positive | 4130418 - 4131461 | 37109.5 |
| hypothetical protein | AN936_RS19165 | Not Available | Negative | 4131465 - 4133147 | 61082.5 |
| tonb-dependent receptor | AN936_RS19170 | Not Available | Negative | 4133215 - 4135827 | 93850.2 |
| sugar kinase | AN936_RS19175 | Not Available | Negative | 4136101 - 4137111 | 34661.3 |
| 2-dehydro-3-deoxy-d-gluconate 5-dehydrogenase kdud | AN936_RS19180 | Q05528 | Negative | 4137121 - 4137876 | 25830.9 |
| 5-dehydro-4-deoxy-d-glucuronate isomerase | AN936_RS19185 | B4RGF4 | Negative | 4137876 - 4138712 | 31114.2 |
| efflux rnd transporter periplasmic adaptor subunit | AN936_RS19190 | P52477 | Positive | 4138958 - 4140094 | 39368.0 |
| efflux rnd transporter permease subunit | AN936_RS19195 | P31224 | Positive | 4140101 - 4143316 | 114996.0 |
| efflux transporter outer membrane subunit | AN936_RS19200 | O31101 | Positive | 4143313 - 4144722 | 48406.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
