Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis macrogoltabida |
| Strain | strain EY-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingopyxis macrogoltabida strain EY-1
Gene Summary
Adenine Count
6284 bp
Thymine Count
6457 bp
Guanine Count
10628 bp
Cytosine Count
11105 bp
Genome Length
34474 bp
Protein-coding Genes
41 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf6118 family protein | AN936_RS23640 | Not Available | Negative | 21612 - 22349 | 26566.9 |
| ti-type conjugative transfer relaxase traa | AN936_RS23645 | Q44363 | Negative | 22357 - 25488 | 115053.0 |
| conjugal transfer protein trad | AN936_RS23650 | Not Available | Positive | 25663 - 25968 | 10322.2 |
| conjugal transfer protein trad | AN936_RS23655 | Not Available | Positive | 26006 - 26224 | 8189.86 |
| hypothetical protein | AN936_RS23660 | Not Available | Positive | 26221 - 26502 | 10115.0 |
| hepn domain-containing protein | AN936_RS23665 | Not Available | Positive | 26499 - 27434 | 35287.1 |
| antitoxin vbha family protein | AN936_RS23670 | Not Available | Positive | 27427 - 27699 | 9703.25 |
| type iv secretory system conjugative dna transfer family protein | AN936_RS23675 | Q00184 | Positive | 27747 - 29438 | 61094.4 |
| hypothetical protein | AN936_RS23680 | Not Available | Positive | 29515 - 29946 | 16263.4 |
| recombinase family protein | AN936_RS23685 | P55559 | Negative | 30009 - 30875 | 32170.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
