Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis macrogoltabida |
| Strain | strain EY-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingopyxis macrogoltabida strain EY-1 isolate activated sludge
Gene Summary
Adenine Count
6284 bp
Thymine Count
6457 bp
Guanine Count
10628 bp
Cytosine Count
11105 bp
Genome Length
34474 bp
Protein-coding Genes
41 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class iii extradiol ring-cleavage dioxygenase | AN936_RS17110 | Q70FG7 | Negative | 3666163 - 3666981 | 28767.4 |
| fmn-dependent nadh-azoreductase | AN936_RS17115 | Q28UD5 | Negative | 3666986 - 3667582 | 20862.8 |
| pirin family protein | AN936_RS17120 | Q9I4C8 | Negative | 3667672 - 3668370 | 25073.1 |
| lysr family transcriptional regulator | AN936_RS17125 | Not Available | Positive | 3668506 - 3669453 | 32956.8 |
| response regulator transcription factor ctra | AN936_RS17130 | P0CAW8 | Positive | 3669658 - 3670365 | 26497.1 |
| pilz domain-containing protein | AN936_RS17135 | Not Available | Negative | 3670451 - 3670885 | 15733.9 |
| succinate dehydrogenase flavoprotein subunit | AN936_RS17140 | Q59661 | Negative | 3671202 - 3673004 | 65418.5 |
| succinate dehydrogenase, hydrophobic membrane anchor protein | AN936_RS17145 | Not Available | Negative | 3673006 - 3673413 | 14490.1 |
| succinate dehydrogenase, cytochrome b556 subunit | AN936_RS17150 | Not Available | Negative | 3673406 - 3673855 | 16141.8 |
| hypothetical protein | AN936_RS17155 | Not Available | Negative | 3674231 - 3674464 | 8186.55 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
