Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis macrogoltabida |
| Strain | strain EY-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingopyxis macrogoltabida strain EY-1 isolate activated sludge
Gene Summary
Adenine Count
6284 bp
Thymine Count
6457 bp
Guanine Count
10628 bp
Cytosine Count
11105 bp
Genome Length
34474 bp
Protein-coding Genes
41 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diaminopimelate epimerase | AN936_RS16270 | Q1GPI7 | Positive | 3496061 - 3496867 | 28499.1 |
| miab/rimo family radical sam methylthiotransferase | AN936_RS16275 | Q9ZDB6 | Positive | 3496864 - 3498102 | 43785.5 |
| signal recognition particle-docking protein ftsy | AN936_RS16280 | A9CHH2 | Positive | 3498099 - 3499025 | 32627.4 |
| inner membrane-spanning protein ycib | AN936_RS16285 | A6WXE1 | Positive | 3499022 - 3499696 | 24446.5 |
| urate hydroxylase puud | AN936_RS16290 | Not Available | Positive | 3499776 - 3500348 | 20836.2 |
| gamma carbonic anhydrase family protein | AN936_RS16295 | Q9C6B3 | Negative | 3500457 - 3501005 | 19237.3 |
| fused mfs/spermidine synthase | AN936_RS16300 | Not Available | Negative | 3501002 - 3503263 | 80938.5 |
| porphobilinogen synthase | AN936_RS16305 | P45622 | Negative | 3503260 - 3504258 | 35410.1 |
| m23 family metallopeptidase | AN936_RS16310 | P44693 | Negative | 3504319 - 3505836 | 53672.5 |
| helicase-related protein | AN936_RS16315 | O74727 | Positive | 3506144 - 3508918 | 98724.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
