Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis macrogoltabida |
| Strain | strain EY-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingopyxis macrogoltabida strain EY-1 isolate activated sludge
Gene Summary
Adenine Count
6284 bp
Thymine Count
6457 bp
Guanine Count
10628 bp
Cytosine Count
11105 bp
Genome Length
34474 bp
Protein-coding Genes
41 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system vapc family toxin | AN936_RS16225 | Not Available | Negative | 3486511 - 3486891 | 13660.3 |
| abrb/maze/spovt family dna-binding domain-containing protein | AN936_RS16230 | Not Available | Negative | 3486888 - 3487175 | 10590.8 |
| lysr substrate-binding domain-containing protein | AN936_RS16235 | Not Available | Negative | 3487221 - 3488141 | 34013.9 |
| hypothetical protein | AN936_RS25105 | Not Available | Positive | 3488247 - 3488399 | 6106.43 |
| ggdef domain-containing protein | AN936_RS16240 | P54595 | Positive | 3488753 - 3489742 | 35484.5 |
| serine hydrolase | AN936_RS16245 | Q5HDB2 | Negative | 3489751 - 3491268 | 54338.2 |
| ribosome maturation factor rimm | AN936_RS16250 | Q1GPJ1 | Negative | 3491327 - 3491821 | 17196.5 |
| dutp diphosphatase | AN936_RS16255 | Q5NNL0 | Negative | 3492050 - 3492526 | 16739.3 |
| signal recognition particle protein | AN936_RS16260 | P0AGD9 | Negative | 3492574 - 3494037 | 51180.1 |
| bifunctional diguanylate cyclase/phosphodiesterase | AN936_RS16265 | Not Available | Positive | 3494289 - 3495920 | 59009.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
