Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis macrogoltabida |
| Strain | strain EY-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingopyxis macrogoltabida strain EY-1 isolate activated sludge
Gene Summary
Adenine Count
6284 bp
Thymine Count
6457 bp
Guanine Count
10628 bp
Cytosine Count
11105 bp
Genome Length
34474 bp
Protein-coding Genes
41 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dmp19 family protein | AN936_RS15930 | Not Available | Positive | 3423781 - 3424437 | 24814.4 |
| l-serine ammonia-lyase | AN936_RS15935 | O86564 | Negative | 3424490 - 3425869 | 48449.1 |
| superoxide dismutase | AN936_RS15940 | Q8YSZ1 | Negative | 3426027 - 3426641 | 22497.0 |
| cisplatin damage response atp-dependent dna ligase | AN936_RS15945 | B1L3K8 | Negative | 3426874 - 3428442 | 58231.4 |
| ligase-associated dna damage response exonuclease | AN936_RS15950 | B1ZZL9 | Negative | 3428439 - 3429452 | 37115.3 |
| udgx family uracil-dna binding protein | AN936_RS15955 | Q9WYY1 | Negative | 3429452 - 3430879 | 53089.7 |
| putative dna modification/repair radical sam protein | AN936_RS15960 | Not Available | Negative | 3430876 - 3432126 | 45888.5 |
| sensor histidine kinase | AN936_RS25830 | A6X554 | Negative | 3432172 - 3433647 | 55290.5 |
| response regulator | AN936_RS15970 | Q0PEV3 | Positive | 3433899 - 3434690 | 28573.8 |
| lysr family transcriptional regulator | AN936_RS15975 | O32186 | Negative | 3434815 - 3435714 | 31706.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
