Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis macrogoltabida |
| Strain | strain EY-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingopyxis macrogoltabida strain EY-1 isolate activated sludge
Gene Summary
Adenine Count
6284 bp
Thymine Count
6457 bp
Guanine Count
10628 bp
Cytosine Count
11105 bp
Genome Length
34474 bp
Protein-coding Genes
41 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv conjugative transfer system protein tral | AN936_RS14360 | Not Available | Positive | 3078239 - 3078505 | 10344.8 |
| trae/trak family type iv conjugative transfer system protein | AN936_RS14365 | Not Available | Positive | 3078514 - 3079155 | 23823.7 |
| type-f conjugative transfer system secretin trak | AN936_RS14370 | Not Available | Positive | 3079139 - 3079903 | 27304.9 |
| trab/virb10 family protein | AN936_RS14375 | Not Available | Positive | 3079900 - 3081192 | 43505.2 |
| trav family lipoprotein | AN936_RS14380 | Not Available | Positive | 3081222 - 3081830 | 22188.6 |
| trac family protein | AN936_RS14385 | Not Available | Positive | 3081827 - 3084355 | 93119.5 |
| hypothetical protein | AN936_RS14390 | Not Available | Positive | 3084352 - 3084684 | 12051.1 |
| hypothetical protein | AN936_RS24730 | Not Available | Positive | 3084681 - 3084923 | 8357.48 |
| hypothetical protein | AN936_RS14395 | Not Available | Positive | 3084970 - 3085596 | 22703.6 |
| trau family protein | AN936_RS14400 | Not Available | Positive | 3086257 - 3087210 | 33889.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
