Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis macrogoltabida |
| Strain | strain EY-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingopyxis macrogoltabida strain EY-1 isolate activated sludge
Gene Summary
Adenine Count
6284 bp
Thymine Count
6457 bp
Guanine Count
10628 bp
Cytosine Count
11105 bp
Genome Length
34474 bp
Protein-coding Genes
41 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| srpbcc domain-containing protein | AN936_RS13560 | Not Available | Positive | 2899946 - 2900410 | 17075.3 |
| serine--trna ligase | AN936_RS13565 | Q1GV79 | Positive | 2900454 - 2901734 | 46942.6 |
| 5'/3'-nucleotidase sure | AN936_RS13570 | Q2NDM8 | Positive | 2901833 - 2902597 | 27404.6 |
| lysm peptidoglycan-binding domain-containing m23 family metallopeptidase | AN936_RS13575 | A0A0H3C9Q9 | Positive | 2902671 - 2903744 | 36889.4 |
| trka family potassium uptake protein | AN936_RS13580 | P56509 | Positive | 2903750 - 2904811 | 38416.6 |
| duf423 domain-containing protein | AN936_RS13585 | Not Available | Negative | 2904808 - 2905134 | 11036.8 |
| 30s ribosomal protein s12 methylthiotransferase rimo | AN936_RS13590 | Q1GV83 | Positive | 2905228 - 2906595 | 49690.3 |
| duf4403 family protein | AN936_RS13595 | Not Available | Positive | 2906866 - 2908332 | 53734.4 |
| inorganic phosphate transporter | AN936_RS13600 | O30499 | Negative | 2908681 - 2909694 | 35594.0 |
| duf47 family protein | AN936_RS13605 | O30498 | Negative | 2909710 - 2910834 | 41789.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
