Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis macrogoltabida |
| Strain | strain EY-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingopyxis macrogoltabida strain EY-1 isolate activated sludge
Gene Summary
Adenine Count
6284 bp
Thymine Count
6457 bp
Guanine Count
10628 bp
Cytosine Count
11105 bp
Genome Length
34474 bp
Protein-coding Genes
41 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| excinuclease abc subunit uvrb | AN936_RS13360 | Q56998 | Positive | 2864666 - 2866852 | 82152.8 |
| s10 family peptidase | AN936_RS13365 | Not Available | Positive | 2867049 - 2868560 | 54715.0 |
| hypothetical protein | AN936_RS13370 | Not Available | Negative | 2868745 - 2869182 | 15870.5 |
| tetr/acrr family transcriptional regulator | AN936_RS13375 | Not Available | Negative | 2869206 - 2869814 | 22365.8 |
| duf4287 domain-containing protein | AN936_RS13380 | Not Available | Negative | 2869826 - 2870380 | 19782.4 |
| nrde family protein | AN936_RS13385 | Not Available | Positive | 2870477 - 2871175 | 24957.8 |
| translation initiation factor if-3 | AN936_RS13390 | Q5NL80 | Negative | 2871188 - 2871724 | 20329.8 |
| penicillin-binding protein activator | AN936_RS13395 | Not Available | Negative | 2871905 - 2873092 | 40896.9 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | AN936_RS13400 | Q2NAK3 | Positive | 2873103 - 2873963 | 29794.7 |
| yran family protein | AN936_RS13405 | Q1GWI7 | Positive | 2873960 - 2874310 | 13739.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
