Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis macrogoltabida |
| Strain | strain EY-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingopyxis macrogoltabida strain EY-1 isolate activated sludge
Gene Summary
Adenine Count
6284 bp
Thymine Count
6457 bp
Guanine Count
10628 bp
Cytosine Count
11105 bp
Genome Length
34474 bp
Protein-coding Genes
41 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trah | AN936_RS12975 | P15069 | Positive | 2759688 - 2761124 | 50759.7 |
| conjugal transfer protein trag n-terminal domain-containing protein | AN936_RS12980 | Not Available | Positive | 2761135 - 2763837 | 96229.4 |
| hypothetical protein | AN936_RS12985 | Not Available | Negative | 2763839 - 2764048 | 8147.64 |
| thermonuclease family protein | AN936_RS25500 | Not Available | Positive | 2764162 - 2764734 | 21285.4 |
| hypothetical protein | AN936_RS25770 | Not Available | Positive | 2764734 - 2764865 | 4924.13 |
| duf6961 family protein | AN936_RS25255 | Not Available | Positive | 2764895 - 2765056 | 6090.16 |
| s24 family peptidase | AN936_RS12995 | Not Available | Positive | 2765360 - 2765995 | 23242.5 |
| hypothetical protein | AN936_RS25505 | Not Available | Negative | 2766047 - 2766319 | 9854.3 |
| is6 family transposase | AN936_RS13000 | Not Available | Negative | 2766592 - 2767314 | 28658.6 |
| fatty acid desaturase | AN936_RS24120 | Not Available | Negative | 2767636 - 2768526 | 33897.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
