Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis macrogoltabida |
| Strain | strain EY-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingopyxis macrogoltabida strain EY-1 isolate activated sludge
Gene Summary
Adenine Count
6284 bp
Thymine Count
6457 bp
Guanine Count
10628 bp
Cytosine Count
11105 bp
Genome Length
34474 bp
Protein-coding Genes
41 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dutp diphosphatase | AN936_RS12880 | P38054 | Positive | 2741370 - 2744537 | 114012.0 |
| copper-binding protein | AN936_RS12885 | Not Available | Positive | 2744516 - 2744893 | 13030.4 |
| alpa family transcriptional regulator | AN936_RS25765 | Not Available | Negative | 2745155 - 2745397 | 9189.07 |
| helix-turn-helix transcriptional regulator | AN936_RS12890 | Not Available | Negative | 2745390 - 2745872 | 17362.7 |
| trbc/virb2 family protein | AN936_RS12895 | Not Available | Positive | 2746233 - 2746559 | 10800.2 |
| type iv conjugative transfer system protein tral | AN936_RS12900 | Not Available | Positive | 2746585 - 2746872 | 10338.7 |
| type iv conjugative transfer system protein trae | AN936_RS12905 | Not Available | Positive | 2746885 - 2747454 | 20725.8 |
| type-f conjugative transfer system secretin trak | AN936_RS12910 | Not Available | Positive | 2747451 - 2748206 | 26476.1 |
| trab/virb10 family protein | AN936_RS12915 | Not Available | Positive | 2748206 - 2749492 | 43843.7 |
| dsbc family protein | AN936_RS12920 | Not Available | Positive | 2749489 - 2750358 | 30567.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
