Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis macrogoltabida |
| Strain | strain EY-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingopyxis macrogoltabida strain EY-1 isolate activated sludge
Gene Summary
Adenine Count
6284 bp
Thymine Count
6457 bp
Guanine Count
10628 bp
Cytosine Count
11105 bp
Genome Length
34474 bp
Protein-coding Genes
41 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)h-binding protein | AN936_RS12685 | Not Available | Positive | 2702371 - 2703369 | 35697.9 |
| rna polymerase sigma factor | AN936_RS12690 | Not Available | Positive | 2703538 - 2704098 | 21006.2 |
| fecr domain-containing protein | AN936_RS12695 | Not Available | Positive | 2704095 - 2705048 | 34667.9 |
| tonb-dependent receptor | AN936_RS12700 | Not Available | Positive | 2705071 - 2707395 | 82857.5 |
| hypothetical protein | AN936_RS12705 | Not Available | Positive | 2707554 - 2707853 | 10309.2 |
| outer membrane protein | AN936_RS12710 | Not Available | Positive | 2707923 - 2708576 | 23237.9 |
| cation diffusion facilitator family transporter | AN936_RS12715 | Not Available | Negative | 2709404 - 2710045 | 22992.1 |
| hypothetical protein | AN936_RS25490 | Not Available | Negative | 2710119 - 2710541 | 15255.3 |
| efflux rnd transporter permease subunit | AN936_RS12720 | Q44586 | Negative | 2710577 - 2713819 | 114968.0 |
| efflux rnd transporter periplasmic adaptor subunit | AN936_RS12725 | P37973 | Negative | 2713863 - 2715008 | 39678.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
