Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis macrogoltabida |
| Strain | strain EY-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingopyxis macrogoltabida strain EY-1 isolate activated sludge
Gene Summary
Adenine Count
6284 bp
Thymine Count
6457 bp
Guanine Count
10628 bp
Cytosine Count
11105 bp
Genome Length
34474 bp
Protein-coding Genes
41 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imidazolonepropionase | AN936_RS12385 | A5VFA5 | Positive | 2630164 - 2631363 | 42209.6 |
| histidine ammonia-lyase | AN936_RS12390 | P58082 | Positive | 2631360 - 2632889 | 52561.3 |
| n-formylglutamate deformylase | AN936_RS12395 | Q9HU92 | Positive | 2632886 - 2633692 | 29362.7 |
| urocanate hydratase | AN936_RS12400 | A5VFA2 | Positive | 2633689 - 2635359 | 60518.2 |
| hutd family protein | AN936_RS12405 | Not Available | Positive | 2635356 - 2635919 | 19972.1 |
| diguanylate cyclase | AN936_RS12410 | P0AA90 | Positive | 2636027 - 2637829 | 66166.2 |
| gfa family protein | AN936_RS12415 | Not Available | Negative | 2637848 - 2638264 | 15169.9 |
| fatty acid--coa ligase | AN936_RS12420 | Not Available | Negative | 2638261 - 2639820 | 56638.7 |
| duf938 domain-containing protein | AN936_RS12425 | Q497C3 | Negative | 2639922 - 2640557 | 22015.2 |
| aba4-like family protein | AN936_RS12430 | Not Available | Negative | 2640554 - 2641003 | 16323.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
