Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis macrogoltabida |
| Strain | strain EY-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingopyxis macrogoltabida strain EY-1 isolate activated sludge
Gene Summary
Adenine Count
6284 bp
Thymine Count
6457 bp
Guanine Count
10628 bp
Cytosine Count
11105 bp
Genome Length
34474 bp
Protein-coding Genes
41 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glu/leu/phe/val dehydrogenase dimerization domain-containing protein | AN936_RS12335 | P54531 | Positive | 2619616 - 2620668 | 36287.3 |
| hypothetical protein | AN936_RS12340 | Not Available | Positive | 2620668 - 2620919 | 9349.4 |
| lysr family transcriptional regulator | AN936_RS12345 | Not Available | Positive | 2620938 - 2621840 | 32682.9 |
| formate dehydrogenase subunit gamma | AN936_RS12350 | Not Available | Positive | 2622055 - 2622522 | 16450.7 |
| nadh-ubiquinone oxidoreductase-f iron-sulfur binding region domain-containing protein | AN936_RS12355 | Q46507 | Positive | 2622519 - 2624114 | 55488.5 |
| formate dehydrogenase subunit alpha | AN936_RS12360 | O34720 | Positive | 2624119 - 2626965 | 103116.0 |
| formate dehydrogenase subunit delta | AN936_RS12365 | Not Available | Positive | 2626965 - 2627207 | 8680.43 |
| formate dehydrogenase accessory sulfurtransferase fdhd | AN936_RS12370 | C5CP12 | Positive | 2627213 - 2627989 | 27566.1 |
| histidine utilization repressor | AN936_RS12375 | Q5PFQ9 | Negative | 2627992 - 2628702 | 25988.3 |
| formimidoylglutamate deiminase | AN936_RS12380 | Q9HU77 | Negative | 2628699 - 2630081 | 49095.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
