Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis macrogoltabida |
| Strain | strain EY-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingopyxis macrogoltabida strain EY-1 isolate activated sludge
Gene Summary
Adenine Count
6284 bp
Thymine Count
6457 bp
Guanine Count
10628 bp
Cytosine Count
11105 bp
Genome Length
34474 bp
Protein-coding Genes
41 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yafy family protein | AN936_RS12235 | Not Available | Positive | 2588574 - 2589296 | 26949.7 |
| dna-directed rna polymerase subunit beta' | AN936_RS12240 | Q1GT24 | Negative | 2589400 - 2593683 | 157882.0 |
| dna-directed rna polymerase subunit beta | AN936_RS12245 | Q1GT23 | Negative | 2593735 - 2597913 | 154143.0 |
| hypothetical protein | AN936_RS12250 | Not Available | Negative | 2598187 - 2598561 | 14009.8 |
| duf4197 domain-containing protein | AN936_RS12255 | Not Available | Negative | 2598628 - 2599296 | 22884.7 |
| tetr/acrr family transcriptional regulator | AN936_RS12260 | Not Available | Negative | 2599353 - 2599979 | 22795.6 |
| tonb-dependent receptor | AN936_RS12265 | Not Available | Positive | 2600179 - 2602545 | 83677.1 |
| marr family winged helix-turn-helix transcriptional regulator | AN936_RS12270 | Not Available | Negative | 2602737 - 2603243 | 19539.6 |
| 3-isopropylmalate dehydratase small subunit | AN936_RS12275 | Q2VZV3 | Positive | 2603443 - 2604030 | 21638.2 |
| 3-isopropylmalate dehydratase large subunit | AN936_RS12280 | B4RCC2 | Negative | 2604027 - 2605445 | 49557.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
