Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis macrogoltabida |
| Strain | strain EY-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingopyxis macrogoltabida strain EY-1 isolate activated sludge
Gene Summary
Adenine Count
6284 bp
Thymine Count
6457 bp
Guanine Count
10628 bp
Cytosine Count
11105 bp
Genome Length
34474 bp
Protein-coding Genes
41 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadph-dependent fmn reductase | AN936_RS12085 | D3KVM6 | Negative | 2558962 - 2559537 | 19864.1 |
| dutp diphosphatase | AN936_RS12090 | Not Available | Negative | 2559783 - 2560758 | 34026.7 |
| type ii 3-dehydroquinate dehydratase | AN936_RS12100 | Q0C000 | Positive | 2560841 - 2561293 | 16393.5 |
| acetyl-coa carboxylase biotin carboxyl carrier protein | AN936_RS12105 | P37799 | Positive | 2561364 - 2561849 | 16250.3 |
| acetyl-coa carboxylase biotin carboxylase subunit | AN936_RS12110 | P37798 | Positive | 2561858 - 2563219 | 49324.2 |
| l,d-transpeptidase family protein | AN936_RS12115 | Not Available | Positive | 2563453 - 2564808 | 47810.3 |
| murein l,d-transpeptidase catalytic domain family protein | AN936_RS12120 | Not Available | Negative | 2564981 - 2565664 | 24579.4 |
| arsenate reductase (glutaredoxin) | AN936_RS12125 | Q92R44 | Positive | 2565935 - 2566279 | 12416.8 |
| efflux transporter outer membrane subunit | AN936_RS12130 | P24145 | Positive | 2566392 - 2567798 | 49053.6 |
| efflux rnd transporter periplasmic adaptor subunit | AN936_RS12135 | Not Available | Positive | 2567795 - 2569201 | 48170.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
