Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis macrogoltabida |
| Strain | strain EY-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingopyxis macrogoltabida strain EY-1 isolate activated sludge
Gene Summary
Adenine Count
6284 bp
Thymine Count
6457 bp
Guanine Count
10628 bp
Cytosine Count
11105 bp
Genome Length
34474 bp
Protein-coding Genes
41 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| recombinase reca | AN936_RS11645 | Q9X5D8 | Negative | 2463837 - 2464916 | 38477.2 |
| response regulator | AN936_RS11650 | Not Available | Negative | 2465030 - 2465383 | 12557.0 |
| response regulator | AN936_RS11655 | Not Available | Negative | 2465373 - 2467718 | 83076.4 |
| m13 family metallopeptidase | AN936_RS11660 | Not Available | Negative | 2467845 - 2469914 | 75080.5 |
| duf2062 domain-containing protein | AN936_RS11665 | Not Available | Negative | 2470011 - 2470640 | 23087.3 |
| ssra-binding protein smpb | AN936_RS11670 | Q1GSC9 | Negative | 2470637 - 2471122 | 18405.2 |
| 4-hydroxy-tetrahydrodipicolinate synthase | AN936_RS11675 | Q1GSC8 | Negative | 2471132 - 2472007 | 30360.1 |
| lytic transglycosylase domain-containing protein | AN936_RS11680 | Not Available | Positive | 2472109 - 2474136 | 72910.3 |
| transcription elongation factor greb | AN936_RS11685 | Q9K0C5 | Positive | 2474143 - 2474631 | 17912.1 |
| hypothetical protein | AN936_RS11690 | Not Available | Positive | 2474760 - 2475404 | 23450.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
