Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis macrogoltabida |
| Strain | strain EY-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingopyxis macrogoltabida strain EY-1 isolate activated sludge
Gene Summary
Adenine Count
6284 bp
Thymine Count
6457 bp
Guanine Count
10628 bp
Cytosine Count
11105 bp
Genome Length
34474 bp
Protein-coding Genes
41 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| simpl domain-containing protein | AN936_RS11545 | Not Available | Negative | 2445264 - 2446010 | 25812.9 |
| abc-f family atp-binding cassette domain-containing protein | AN936_RS11550 | Q45978 | Positive | 2446411 - 2448186 | 64405.0 |
| duf6456 domain-containing protein | AN936_RS11555 | Not Available | Negative | 2448363 - 2448770 | 14361.3 |
| helix-turn-helix domain-containing protein | AN936_RS11560 | Not Available | Positive | 2448934 - 2449494 | 20341.7 |
| glycosyltransferase | AN936_RS11565 | A4T324 | Positive | 2449529 - 2450695 | 41232.1 |
| protein translocase subunit secf | AN936_RS11570 | O33568 | Negative | 2450692 - 2451672 | 35527.8 |
| protein translocase subunit secd | AN936_RS11575 | Q1RIN3 | Negative | 2451686 - 2453299 | 57416.7 |
| preprotein translocase subunit yajc | AN936_RS11580 | Not Available | Negative | 2453350 - 2453679 | 11600.3 |
| Trna-pro | Not Available | Not Available | Positive | 2453953 - 2454029 | Not Available |
| tsup family transporter | AN936_RS11590 | Not Available | Positive | 2454108 - 2454851 | 26176.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
