Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis macrogoltabida |
| Strain | strain EY-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingopyxis macrogoltabida strain EY-1 isolate activated sludge
Gene Summary
Adenine Count
6284 bp
Thymine Count
6457 bp
Guanine Count
10628 bp
Cytosine Count
11105 bp
Genome Length
34474 bp
Protein-coding Genes
41 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c-type biogenesis protein | AN936_RS11500 | P45405 | Negative | 2437796 - 2438209 | 14789.7 |
| dsbe family thiol:disulfide interchange protein | AN936_RS11505 | Q9Z645 | Negative | 2438224 - 2438754 | 19115.4 |
| heme lyase ccmf/nrfe family subunit | AN936_RS11510 | P45404 | Negative | 2439028 - 2440986 | 69535.6 |
| cytochrome c maturation protein ccme | AN936_RS11515 | Q1GSZ2 | Negative | 2440983 - 2441420 | 15274.7 |
| hypothetical protein | AN936_RS25245 | Not Available | Negative | 2441417 - 2441572 | 5543.74 |
| heme abc transporter permease ccmc | AN936_RS11520 | P30962 | Negative | 2441569 - 2442309 | 26544.8 |
| yban family protein | AN936_RS11525 | P0AAR6 | Negative | 2442636 - 2442989 | 12729.9 |
| glu/leu/phe/val dehydrogenase | AN936_RS11530 | P13154 | Negative | 2443137 - 2444189 | 36124.1 |
| Trna-his | Not Available | Not Available | Positive | 2444286 - 2444362 | Not Available |
| 2og-fe(ii) oxygenase | AN936_RS11540 | F4JAU3 | Positive | 2444477 - 2445157 | 25407.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
