Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis macrogoltabida |
| Strain | strain EY-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingopyxis macrogoltabida strain EY-1 isolate activated sludge
Gene Summary
Adenine Count
6284 bp
Thymine Count
6457 bp
Guanine Count
10628 bp
Cytosine Count
11105 bp
Genome Length
34474 bp
Protein-coding Genes
41 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1345 domain-containing protein | AN936_RS00265 | Not Available | Negative | 49458 - 50096 | 23025.2 |
| histidine--trna ligase | AN936_RS00270 | Q2GBN6 | Positive | 50174 - 51421 | 45344.8 |
| peptide chain release factor 1 | AN936_RS00275 | Q1GPK3 | Positive | 51421 - 52488 | 38551.8 |
| peptide chain release factor n(5)-glutamine methyltransferase | AN936_RS00280 | Q2RWE0 | Positive | 52481 - 53308 | 29193.1 |
| duf4167 domain-containing protein | AN936_RS00285 | Not Available | Positive | 53564 - 54445 | 32607.1 |
| duf4139 domain-containing protein | AN936_RS00290 | Not Available | Positive | 54570 - 55955 | 50068.9 |
| duf4139 domain-containing protein | AN936_RS00295 | Not Available | Positive | 55994 - 57544 | 55230.8 |
| acyl-coa thioesterase | AN936_RS00300 | P0A1A2 | Negative | 57541 - 57939 | 14269.2 |
| hypothetical protein | AN936_RS00305 | Not Available | Negative | 57929 - 58237 | 11096.5 |
| cbs domain-containing protein | AN936_RS00310 | Not Available | Positive | 58370 - 58795 | 15353.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
