Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis macrogoltabida |
| Strain | strain EY-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingopyxis macrogoltabida strain EY-1 isolate activated sludge
Gene Summary
Adenine Count
6284 bp
Thymine Count
6457 bp
Guanine Count
10628 bp
Cytosine Count
11105 bp
Genome Length
34474 bp
Protein-coding Genes
41 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m28 family metallopeptidase | AN936_RS10265 | Not Available | Positive | 2162965 - 2164647 | 60433.3 |
| agmatine deiminase family protein | AN936_RS10270 | A4VFL7 | Positive | 2164754 - 2165737 | 34593.7 |
| n-carbamoylputrescine amidase | AN936_RS10275 | Q9XGI9 | Positive | 2165745 - 2166596 | 31254.2 |
| atp-binding protein | AN936_RS10280 | Not Available | Negative | 2166701 - 2168161 | 52586.1 |
| hypothetical protein | AN936_RS10285 | Not Available | Positive | 2168266 - 2168529 | 10073.8 |
| duf1905 domain-containing protein | AN936_RS10290 | Not Available | Negative | 2168519 - 2168833 | 11190.3 |
| peptidylprolyl isomerase | AN936_RS10295 | Not Available | Negative | 2168840 - 2169838 | 35560.1 |
| Trna-ser | Not Available | Not Available | Positive | 2169913 - 2170003 | Not Available |
| erythromycin esterase family protein | AN936_RS10305 | P9WLM0 | Negative | 2170038 - 2171345 | 46703.6 |
| serine hydrolase | AN936_RS10310 | P15555 | Negative | 2171342 - 2172943 | 57111.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
