Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis macrogoltabida |
| Strain | strain EY-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingopyxis macrogoltabida strain EY-1 isolate activated sludge
Gene Summary
Adenine Count
6284 bp
Thymine Count
6457 bp
Guanine Count
10628 bp
Cytosine Count
11105 bp
Genome Length
34474 bp
Protein-coding Genes
41 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ubiquinol-cytochrome c reductase iron-sulfur subunit | AN936_RS09485 | P23136 | Negative | 2006835 - 2007392 | 19669.5 |
| trna (cytidine(34)-2'-o)-methyltransferase | AN936_RS09490 | C7BSD3 | Positive | 2007615 - 2008073 | 15847.0 |
| oxygen-dependent coproporphyrinogen oxidase | AN936_RS09495 | Q9AAT8 | Positive | 2008070 - 2008930 | 31878.4 |
| glycerophosphoryl diester phosphodiesterase membrane domain-containing protein | AN936_RS09500 | Not Available | Negative | 2008994 - 2009848 | 29553.5 |
| hypothetical protein | AN936_RS09505 | Not Available | Negative | 2009897 - 2010712 | 28250.4 |
| lipoyl(octanoyl) transferase lipb | AN936_RS09510 | Q1GTF8 | Positive | 2010845 - 2011498 | 23447.9 |
| hypothetical protein | AN936_RS09515 | Not Available | Positive | 2011508 - 2011849 | 11212.9 |
| 7-carboxy-7-deazaguanine synthase | AN936_RS09520 | Q89SC0 | Negative | 2011853 - 2012485 | 22989.4 |
| 7-cyano-7-deazaguanine synthase quec | AN936_RS09525 | Q1GTF3 | Negative | 2012482 - 2013171 | 24550.3 |
| hypothetical protein | AN936_RS09530 | Not Available | Negative | 2013365 - 2013760 | 14290.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
