Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis macrogoltabida |
| Strain | strain EY-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingopyxis macrogoltabida strain EY-1 isolate activated sludge
Gene Summary
Adenine Count
6284 bp
Thymine Count
6457 bp
Guanine Count
10628 bp
Cytosine Count
11105 bp
Genome Length
34474 bp
Protein-coding Genes
41 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein insertion efficiency factor yidd | AN936_RS00075 | Q1GN72 | Negative | 14553 - 14765 | 7761.72 |
| ribonuclease p protein component | AN936_RS00080 | Q2N7X0 | Negative | 15024 - 15362 | 12275.0 |
| 50s ribosomal protein l34 | AN936_RS00085 | Q0BU81 | Negative | 15392 - 15526 | 5148.47 |
| pgpgw domain-containing protein | AN936_RS00090 | Not Available | Negative | 15628 - 15939 | 11864.9 |
| duf1905 domain-containing protein | AN936_RS00095 | Not Available | Negative | 16199 - 16492 | 10388.6 |
| yifb family mg chelatase-like aaa atpase | AN936_RS00100 | P57015 | Negative | 16498 - 18006 | 51936.1 |
| tetr/acrr family transcriptional regulator | AN936_RS00105 | Not Available | Positive | 18531 - 19247 | 25257.3 |
| voc family protein | AN936_RS00110 | Not Available | Positive | 19293 - 19736 | 15644.3 |
| doxx family protein | AN936_RS00115 | Not Available | Positive | 19760 - 20176 | 14707.8 |
| duf4287 domain-containing protein | AN936_RS00120 | Not Available | Positive | 20173 - 20391 | 7631.18 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
