Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis macrogoltabida |
| Strain | strain EY-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingopyxis macrogoltabida strain EY-1 isolate activated sludge
Gene Summary
Adenine Count
6284 bp
Thymine Count
6457 bp
Guanine Count
10628 bp
Cytosine Count
11105 bp
Genome Length
34474 bp
Protein-coding Genes
41 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| virb4 family type iv secretion/conjugal transfer atpase | AN936_RS07020 | Q9R2W4 | Negative | 1501632 - 1504022 | 88360.4 |
| type iv secretion system protein virb3 | AN936_RS07025 | Q9S3N1 | Negative | 1504042 - 1504365 | 11756.5 |
| trbc/virb2 family protein | AN936_RS07030 | Not Available | Negative | 1504392 - 1504757 | 12824.0 |
| lytic transglycosylase domain-containing protein | AN936_RS07035 | Q9RPY4 | Negative | 1504745 - 1505416 | 24117.7 |
| luxr family transcriptional regulator | AN936_RS07040 | P55629 | Positive | 1505834 - 1506577 | 27359.7 |
| is3 family transposase | AN936_RS07045 | Not Available | Negative | 1506675 - 1507822 | 43922.9 |
| transposase | AN936_RS07055 | Not Available | Positive | 1507923 - 1508291 | 12526.8 |
| lrp/asnc family transcriptional regulator | AN936_RS24060 | O31497 | Negative | 1508504 - 1508977 | 17540.5 |
| sigma factor-like helix-turn-helix dna-binding protein | AN936_RS24065 | Not Available | Negative | 1509224 - 1509529 | 11949.6 |
| hypothetical protein | AN936_RS25450 | Not Available | Negative | 1509522 - 1509998 | 17839.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
