Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis macrogoltabida |
| Strain | strain EY-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingopyxis macrogoltabida strain EY-1 isolate activated sludge
Gene Summary
Adenine Count
6284 bp
Thymine Count
6457 bp
Guanine Count
10628 bp
Cytosine Count
11105 bp
Genome Length
34474 bp
Protein-coding Genes
41 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | AN936_RS06555 | P0AFN8 | Positive | 1400944 - 1401711 | 28303.6 |
| integration host factor subunit beta | AN936_RS06560 | A8IN83 | Negative | 1401809 - 1402087 | 10312.3 |
| 30s ribosomal protein s1 | AN936_RS06565 | P14129 | Negative | 1402284 - 1403996 | 61767.5 |
| d(cmp) kinase | AN936_RS06570 | A7IEB7 | Negative | 1404167 - 1404799 | 22072.0 |
| hypothetical protein | AN936_RS06575 | Not Available | Negative | 1404799 - 1405326 | 18378.9 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | AN936_RS06580 | Q1GT16 | Negative | 1405430 - 1406785 | 46595.6 |
| tigr02300 family protein | AN936_RS06585 | Not Available | Positive | 1406911 - 1407234 | 11748.2 |
| Trna-ala | Not Available | Not Available | Positive | 1407354 - 1407429 | Not Available |
| hypothetical protein | AN936_RS06595 | Not Available | Positive | 1407872 - 1408111 | 7890.52 |
| rrf2 family transcriptional regulator | AN936_RS06600 | Not Available | Negative | 1408150 - 1408596 | 16534.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
