Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis macrogoltabida |
| Strain | strain EY-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingopyxis macrogoltabida strain EY-1 isolate activated sludge
Gene Summary
Adenine Count
6284 bp
Thymine Count
6457 bp
Guanine Count
10628 bp
Cytosine Count
11105 bp
Genome Length
34474 bp
Protein-coding Genes
41 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent siderophore receptor | AN936_RS06245 | Not Available | Positive | 1337068 - 1339719 | 94297.1 |
| is21 family transposase | AN936_RS06250 | Not Available | Positive | 1339832 - 1341346 | 57558.9 |
| is21-like element helper atpase istb | AN936_RS06255 | Not Available | Positive | 1341333 - 1342061 | 27070.8 |
| trbi/virb10 family protein | AN936_RS25440 | Not Available | Positive | 1342234 - 1342461 | 8214.73 |
| duf2274 domain-containing protein | AN936_RS06265 | Not Available | Positive | 1342458 - 1342679 | 8291.12 |
| Trna-lys | Not Available | Not Available | Positive | 1342902 - 1342977 | Not Available |
| rod shape-determining protein roda | AN936_RS06275 | P44468 | Negative | 1343090 - 1344196 | 39609.7 |
| penicillin-binding protein 2 | AN936_RS06280 | P0AD67 | Negative | 1344193 - 1346112 | 69776.7 |
| hypothetical protein | AN936_RS06285 | Not Available | Negative | 1346123 - 1346644 | 19154.2 |
| rod shape-determining protein mrec | AN936_RS06290 | Q70AN6 | Negative | 1346641 - 1347534 | 30734.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
