Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis macrogoltabida |
| Strain | strain EY-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingopyxis macrogoltabida strain EY-1 isolate activated sludge
Gene Summary
Adenine Count
6284 bp
Thymine Count
6457 bp
Guanine Count
10628 bp
Cytosine Count
11105 bp
Genome Length
34474 bp
Protein-coding Genes
41 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylenetetrahydrofolate reductase | AN936_RS06090 | P0AEZ1 | Positive | 1310323 - 1311261 | 33312.6 |
| homocysteine s-methyltransferase family protein | AN936_RS06095 | O33465 | Positive | 1311258 - 1312307 | 37041.0 |
| gnat family n-acetyltransferase | AN936_RS06100 | Not Available | Positive | 1312312 - 1312836 | 18348.0 |
| methionine synthase | AN936_RS06105 | P13009 | Positive | 1312799 - 1315477 | 98189.3 |
| right-handed parallel beta-helix repeat-containing protein | AN936_RS06110 | Not Available | Positive | 1315571 - 1316530 | 33621.8 |
| ybjn domain-containing protein | AN936_RS06115 | Not Available | Negative | 1316643 - 1317149 | 18717.9 |
| accessory factor ubik family protein | AN936_RS06120 | Not Available | Negative | 1317242 - 1317580 | 11784.2 |
| tspo/mbr family protein | AN936_RS06125 | Q9GMC9 | Negative | 1317617 - 1318165 | 20004.9 |
| tlya family rna methyltransferase | AN936_RS06130 | P19672 | Negative | 1318230 - 1318970 | 26445.7 |
| protein-disulfide reductase dsbd | AN936_RS06135 | Not Available | Negative | 1318970 - 1320883 | 66728.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
