Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis macrogoltabida |
| Strain | strain EY-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingopyxis macrogoltabida strain EY-1 isolate activated sludge
Gene Summary
Adenine Count
6284 bp
Thymine Count
6457 bp
Guanine Count
10628 bp
Cytosine Count
11105 bp
Genome Length
34474 bp
Protein-coding Genes
41 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system rele/pare family toxin | AN936_RS23855 | Not Available | Positive | 7366 - 7656 | 11436.8 |
| higa family addiction module antitoxin | AN936_RS23860 | Q57475 | Positive | 7666 - 7998 | 11961.8 |
| n-6 dna methylase | AN936_RS23865 | Not Available | Positive | 8033 - 8659 | 23184.1 |
| eco57i restriction-modification methylase domain-containing protein | AN936_RS23870 | P75451 | Positive | 8681 - 10261 | 58885.0 |
| giy-yig nuclease family protein | AN936_RS23875 | P75452 | Positive | 10251 - 12809 | 95947.4 |
| aaa family atpase | AN936_RS23880 | Q9P3A7 | Positive | 12898 - 14022 | 40764.2 |
| s8 family serine peptidase | AN936_RS23885 | Not Available | Positive | 14015 - 15757 | 62565.6 |
| tn3 family transposase | AN936_RS23890 | Q06238 | Positive | 15879 - 18788 | 109016.0 |
| recombinase family protein | AN936_RS23895 | P55559 | Positive | 18931 - 19797 | 32170.6 |
| Terminase large subunit | AN936_RS00970 | Not Available | Positive | 201720 - 203054 | 47902.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
