Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis macrogoltabida |
| Strain | strain EY-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingopyxis macrogoltabida strain EY-1 isolate activated sludge
Gene Summary
Adenine Count
6284 bp
Thymine Count
6457 bp
Guanine Count
10628 bp
Cytosine Count
11105 bp
Genome Length
34474 bp
Protein-coding Genes
41 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bon domain-containing protein | AN936_RS24015 | Not Available | Negative | 1160481 - 1161275 | 30648.3 |
| exodeoxyribonuclease iii | AN936_RS05345 | Not Available | Negative | 1161561 - 1162367 | 30172.4 |
| hypothetical protein | AN936_RS24610 | Not Available | Negative | 1162364 - 1162585 | 7391.79 |
| duf3606 domain-containing protein | AN936_RS05350 | Not Available | Positive | 1162681 - 1162860 | 6520.62 |
| hypothetical protein | AN936_RS05355 | Not Available | Positive | 1162860 - 1163132 | 9770.37 |
| alpha-ketoglutarate-dependent dioxygenase alkb | AN936_RS05360 | Not Available | Negative | 1163167 - 1163754 | 21529.5 |
| hypothetical protein | AN936_RS25025 | Not Available | Positive | 1163865 - 1164002 | 5181.29 |
| hypothetical protein | AN936_RS25235 | Not Available | Negative | 1164095 - 1164271 | 6302.26 |
| flavodoxin family protein | AN936_RS05365 | Not Available | Negative | 1164569 - 1165177 | 21596.9 |
| prc-barrel domain-containing protein | AN936_RS05370 | Not Available | Negative | 1165515 - 1165886 | 13421.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
