Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis macrogoltabida |
| Strain | strain EY-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingopyxis macrogoltabida strain EY-1 isolate activated sludge
Gene Summary
Adenine Count
6284 bp
Thymine Count
6457 bp
Guanine Count
10628 bp
Cytosine Count
11105 bp
Genome Length
34474 bp
Protein-coding Genes
41 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv secretion system protein trac | AN936_RS05195 | Not Available | Negative | 1128166 - 1130709 | 93012.1 |
| conjugal transfer protein trav | AN936_RS05200 | Not Available | Negative | 1130709 - 1131518 | 27798.3 |
| dsbc family protein | AN936_RS05205 | Not Available | Negative | 1131523 - 1132437 | 31960.5 |
| trbi/virb10 family protein | AN936_RS05210 | Not Available | Negative | 1132434 - 1133774 | 45802.1 |
| type-f conjugative transfer system secretin trak | AN936_RS05215 | Not Available | Negative | 1133767 - 1134522 | 26840.7 |
| type iv conjugative transfer system protein trae | AN936_RS05220 | Not Available | Negative | 1134522 - 1135094 | 20956.2 |
| type iv conjugative transfer system protein tral | AN936_RS05225 | Not Available | Negative | 1135106 - 1135393 | 10562.0 |
| hypothetical protein | AN936_RS05230 | Not Available | Negative | 1135420 - 1135749 | 10608.1 |
| hypothetical protein | AN936_RS05235 | Not Available | Positive | 1136100 - 1136561 | 17128.8 |
| alpa family phage regulatory protein | AN936_RS05240 | Not Available | Positive | 1136632 - 1136841 | 7882.64 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
