Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis macrogoltabida |
| Strain | strain EY-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingopyxis macrogoltabida strain EY-1 isolate activated sludge
Gene Summary
Adenine Count
6284 bp
Thymine Count
6457 bp
Guanine Count
10628 bp
Cytosine Count
11105 bp
Genome Length
34474 bp
Protein-coding Genes
41 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv secretion system dna-binding domain-containing protein | AN936_RS05045 | Not Available | Positive | 1088996 - 1091392 | 88095.7 |
| mobf family relaxase | AN936_RS05050 | Not Available | Positive | 1091430 - 1094357 | 106087.0 |
| hypothetical protein | AN936_RS25415 | Not Available | Positive | 1094428 - 1094667 | 8740.49 |
| duf6961 family protein | AN936_RS25420 | Not Available | Negative | 1094691 - 1094888 | 7233.59 |
| duf5818 domain-containing protein | AN936_RS05065 | Not Available | Negative | 1094888 - 1095193 | 10771.9 |
| thermonuclease family protein | AN936_RS24005 | Not Available | Negative | 1095190 - 1095615 | 14866.9 |
| s24 family peptidase | AN936_RS05070 | Not Available | Negative | 1095628 - 1096269 | 23684.4 |
| dna (cytosine-5-)-methyltransferase | AN936_RS05075 | P05101 | Positive | 1096608 - 1097972 | 50828.5 |
| very short patch repair endonuclease | AN936_RS05080 | Not Available | Positive | 1097965 - 1098417 | 17220.0 |
| type ii restriction endonuclease | AN936_RS05085 | Not Available | Positive | 1098430 - 1099635 | 45713.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
