Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis macrogoltabida |
| Strain | strain EY-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingopyxis macrogoltabida strain EY-1 isolate activated sludge
Gene Summary
Adenine Count
6284 bp
Thymine Count
6457 bp
Guanine Count
10628 bp
Cytosine Count
11105 bp
Genome Length
34474 bp
Protein-coding Genes
41 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-tyr | Not Available | Not Available | Positive | 1048847 - 1048932 | Not Available |
| site-specific integrase | AN936_RS04870 | P76542 | Positive | 1049129 - 1050340 | 44137.2 |
| lytic transglycosylase domain-containing protein | AN936_RS23975 | Not Available | Negative | 1050433 - 1051089 | 23221.8 |
| toprim domain-containing protein | AN936_RS04880 | Not Available | Positive | 1051215 - 1052111 | 32189.5 |
| strawberry notch-like ntp hydrolase domain-containing protein | AN936_RS04885 | Q5F371 | Positive | 1052187 - 1054403 | 79253.9 |
| site-specific integrase | AN936_RS04890 | Not Available | Positive | 1054494 - 1055726 | 46554.2 |
| tyrosine-type recombinase/integrase | AN936_RS04895 | Not Available | Positive | 1055723 - 1057078 | 52111.1 |
| site-specific integrase | AN936_RS04900 | Not Available | Positive | 1057075 - 1058079 | 37611.2 |
| hypothetical protein | AN936_RS25395 | Not Available | Positive | 1058317 - 1058490 | 6212.5 |
| tyrosine-type recombinase/integrase | AN936_RS04905 | Not Available | Negative | 1058629 - 1059633 | 37646.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
