Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis macrogoltabida |
| Strain | strain EY-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingopyxis macrogoltabida strain EY-1 isolate activated sludge
Gene Summary
Adenine Count
6284 bp
Thymine Count
6457 bp
Guanine Count
10628 bp
Cytosine Count
11105 bp
Genome Length
34474 bp
Protein-coding Genes
41 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| voc family protein | AN936_RS04610 | Q02481 | Negative | 1003420 - 1003830 | 15279.0 |
| heme exporter protein ccmb | AN936_RS04615 | P30964 | Negative | 1003827 - 1004474 | 21915.7 |
| heme abc exporter atp-binding protein ccma | AN936_RS04620 | Q1GS38 | Negative | 1004471 - 1005055 | 20557.2 |
| metallopeptidase family protein | AN936_RS04625 | Not Available | Negative | 1005052 - 1005480 | 15612.4 |
| 4a-hydroxytetrahydrobiopterin dehydratase | AN936_RS04630 | A5FWK8 | Positive | 1005532 - 1005819 | 10828.8 |
| yoak family protein | AN936_RS04635 | Not Available | Positive | 1005824 - 1006465 | 22094.4 |
| amino acid permease | AN936_RS04640 | O07576 | Positive | 1006523 - 1007920 | 48535.5 |
| zf-tfiib domain-containing protein | AN936_RS04645 | Not Available | Negative | 1007924 - 1008211 | 10898.9 |
| helix-turn-helix transcriptional regulator | AN936_RS04650 | O31834 | Negative | 1008367 - 1008576 | 7513.25 |
| duf2975 domain-containing protein | AN936_RS04655 | Not Available | Negative | 1008576 - 1009103 | 18117.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
