Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis macrogoltabida |
| Strain | strain EY-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingopyxis macrogoltabida strain EY-1 isolate activated sludge
Gene Summary
Adenine Count
6284 bp
Thymine Count
6457 bp
Guanine Count
10628 bp
Cytosine Count
11105 bp
Genome Length
34474 bp
Protein-coding Genes
41 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | AN936_RS04510 | P52076 | Positive | 975827 - 976504 | 24445.7 |
| hamp domain-containing sensor histidine kinase | AN936_RS04515 | Q8GP19 | Positive | 976501 - 977529 | 36992.1 |
| response regulator transcription factor | AN936_RS04520 | Q1M7A0 | Positive | 977718 - 978473 | 27237.0 |
| response regulator | AN936_RS04525 | Not Available | Positive | 978529 - 978939 | 14104.8 |
| peroxidase family protein | AN936_RS04530 | P07202 | Positive | 979216 - 984981 | 199564.0 |
| type i secretion system permease/atpase | AN936_RS04535 | Q03024 | Positive | 985071 - 986813 | 61490.1 |
| hlyd family type i secretion periplasmic adaptor subunit | AN936_RS04540 | Q03025 | Positive | 986810 - 988168 | 49245.7 |
| mfs transporter | AN936_RS04545 | Not Available | Negative | 988187 - 989545 | 47101.8 |
| tonb-dependent receptor | AN936_RS04550 | Not Available | Negative | 989683 - 991812 | 76743.9 |
| prolyl oligopeptidase family serine peptidase | AN936_RS04555 | Not Available | Negative | 991953 - 994010 | 74075.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
