Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | 4c strain 1205 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
59349 bp
Thymine Count
60879 bp
Guanine Count
52267 bp
Cytosine Count
49565 bp
Genome Length
222060 bp
Protein-coding Genes
270 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| repa leader peptide tap | AD871_RS27895 | Not Available | Positive | 207973 - 208047 | 2699.38 |
| incfii family plasmid replication initiator repa | AD871_RS27900 | Not Available | Positive | 208040 - 208897 | 32767.7 |
| hypothetical protein | AD871_RS31180 | Not Available | Positive | 209598 - 209789 | 6787.37 |
| is91 family transposase | AD871_RS27910 | Not Available | Negative | 210019 - 211214 | 45695.9 |
| hypothetical protein | AD871_RS27915 | Not Available | Negative | 211224 - 211412 | 6885.48 |
| omptin family outer membrane protease icsp | AD871_RS27920 | Not Available | Positive | 211558 - 211713 | 5796.98 |
| t3ss effector e3 ubiquitin-protein ligase ipah1.4 | AD871_RS27925 | Not Available | Negative | 211743 - 213470 | 64863.0 |
| type 3 secretion system effector ospe1 | AD871_RS27930 | Not Available | Negative | 213860 - 214126 | 9988.99 |
| omptin family outer membrane protease icsp | AD871_RS30865 | Not Available | Negative | 214235 - 214365 | 5148.22 |
| omptin family outer membrane protease icsp | AD871_RS30870 | Not Available | Positive | 214363 - 214446 | 3171.86 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





