Shigella flexneri 5 str. 8401

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Shigella

Description

Shigella flexneri 5 str. 8401 is a gram-negative, rod-shaped bacterium that thrives optimally at moderate temperatures, classified as a mesophile. It is a chemoheterotroph, deriving energy from organic compounds. This opportunistic pathogen colonizes the intestinal tract of humans, primarily affecting the large intestine, where it causes shigellosis, an infectious disease characterized by diarrhea, fever, and abdominal pain. The gram-negative classification of *S. flexneri* indicates the presence of a thin peptidoglycan layer and an outer membrane containing lipopolysaccharides, which contribute to its pathogenicity and ability to evade the host's immune response. The rod shape, or bacillus form, allows for efficient motility and colonization within the human gastrointestinal tract. As a mesophile, *S. flexneri* flourishes between 30°C and 37°C, aligning with the human body temperature, which enhances its infectious potential. Being a chemoheterotroph, *S. flexneri* relies on pre-formed organic molecules for energy and carbon. This metabolic strategy is crucial for survival in the nutrient-rich environment of the human gut. As a facultative anaerobe, *S. flexneri* can grow in both aerobic and anaerobic conditions, allowing it to adapt and thrive within the fluctuating oxygen levels of the intestinal ecosystem. This bacterium possesses a type III secretion system (T3SS), which it uses to inject virulence factors directly into host cells, promoting invasion and evasion of the immune response. The genetic diversity within *S. flexneri* strains, including strain 8401, has implications for vaccine development and public health strategies, as certain serotypes exhibit increased virulence. Furthermore, its learned resistance to multiple antibiotics poses significant challenges in treating shigellosis, accentuating the need for ongoing research and novel therapeutic approaches in managing this pathogen.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusShigella
SpeciesShigella flexneri
Strain8401

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Shigella flexneri 5 str. 8401
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementPairs - Singles
SporulationNonsporulating
Energy sourceChemoorganotroph
PathogenicityYes

Genome Summary

Shigella flexneri 5 str. 8401

Accession NumberNC_008258.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

No genes available for this genome.

Pathways

7 pathways

Metabolites

34 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da
BASm0001885Tetra-mu3-sulfido-tetrairon(1+)Fe4S4Chemical structure of Tetra-mu3-sulfido-tetrairon(1+)Not available
Average351.62Da
Monoisotopic351.62748Da
BASm00021577-cyano-7-deazaguanineC7H5N5OChemical structure of 7-cyano-7-deazaguanineNot available
Average175.1475Da
Monoisotopic175.0494098Da
BASm00021923-(2,3-dihydroxyphenyl)propanoateC9H9O4Chemical structure of 3-(2,3-dihydroxyphenyl)propanoateNot available
Average181.1654Da
Monoisotopic181.0500838Da
BASm00022412-demethylmenaquinone-8C50H70O2Chemical structure of 2-demethylmenaquinone-8Not available
Average703.0896Da
Monoisotopic702.5375815Da
BASm0002759dTDP-beta-L-rhamnoseC16H24N2O15P2Not availableNot available
Average546.316Da
Monoisotopic546.066289237Da
BASm0002906all-trans-octaprenyl diphosphateC40H65O7P2Chemical structure of all-trans-octaprenyl diphosphateNot available
Average719.8874Da
Monoisotopic719.4205525Da
BASm0003631(1R,6R)-6-hydroxy-2-succinyl-cyclohexa-2,4-diene-1-carboxylateC11H10O6Chemical structure of (1R,6R)-6-hydroxy-2-succinyl-cyclohexa-2,4-diene-1-carboxylateNot available
Average238.196Da
Monoisotopic238.0488352Da

Displaying 1–10 of 34 metabolites