Shigella flexneri 4c strain 1205

Gram-negativeRodMotileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Shigella

Description

Shigella flexneri 4c strain 1205 is a Gram-negative, rod-shaped bacterium that typically exists in pairs or as single cells. This strain is nonsporulating and exhibits facultative anaerobic metabolism, indicating its ability to thrive in both the presence and absence of oxygen. As a chemoorganotroph, S. flexneri 4c strain 1205 derives its energy from organic compounds, which aligns with its habitat being primarily host-associated. The optimal growth temperature for this strain is around 37.0°C, a condition that coincides with the average human body temperature, suggesting a close adaptation to its host environment. The facultative nature of S. flexneri 4c strain 1205, coupled with its nonsporulating characteristic, may contribute to its survival and proliferation within host organisms, where it can exploit various metabolic pathways to adapt to changing environmental conditions. This adaptability hints at the bacterium's potential for persistence within the gastrointestinal tract, where it would encounter fluctuating oxygen levels and a diverse array of organic substrates. Understanding the metabolic flexibility and ecological niche of S. flexneri 4c strain 1205 can provide valuable insights into its role within host-associated microbial communities and its implications for human health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusShigella
SpeciesShigella flexneri
Strain4c strain 1205

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Shigella flexneri 4c strain 1205
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs-Singles
SporulationNonsporulating
Energy source Chemoorganotroph
PathogenicityHuman

Genome Summary

Shigella flexneri 4c strain 1205


Gene Summary

Adenine Count

59349 bp

Thymine Count

60879 bp

Guanine Count

52267 bp

Cytosine Count

49565 bp

Genome Length

222060 bp

Protein-coding Genes

270 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
omptin family outer membrane protease icspAD871_RS29620Not Available-191 - 56113017.5
omptin family outer membrane protease icspAD871_RS29625Not Available+806 - 9254907.91
type 3 secretion system effector ospbAD871_RS26545Not Available+1176 - 204232422.7
pap2 family phosphatase phon2AD871_RS26550Not Available+2371 - 311127574.6
hypothetical proteinAD871_RS31045Not Available+3184 - 33064362.17
omptin family outer membrane protease icspAD871_RS30230Not Available-3464 - 491954082.4
omptin family outer membrane protease icspAD871_RS26565Not Available-5286 - 580419215.2
omptin family outer membrane protease icspAD871_RS26570Not Available-5821 - 60579159.94
omptin family outer membrane protease icspAD871_RS26575Not Available-6108 - 726442052.0
shet2/espl2 family type iii secretion system effector toxinAD871_RS26580Not Available-7436 - 914565076.6

Displaying genes 1 – 10 of 5400 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites