Sphingopyxis macrogoltabida strain 203

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Sphingopyxis macrogoltabida strain 203 is a Gram-negative, rod-shaped bacterium predominantly found in soil environments. This species is characterized by its unique genetic architecture, possessing three replicons, which can contribute to its adaptability and genetic diversity. The presence of multiple replicons is often associated with increased resilience and the ability to thrive in various ecological niches. This strain is part of the Sphingopyxis genus, which includes bacteria capable of degrading complex organic compounds, underscoring its potential ecological role in bioremediation and nutrient cycling within soil ecosystems. The ability to metabolize various substrates can be advantageous for survival in diverse soil habitats, where organic matter decomposition is crucial for maintaining soil health and fertility. The genetic information for Sphingopyxis macrogoltabida strain 203 is documented with the following accessions: NZ_CP009431.1, NZ_CP009430.1, and NZ_CP009429.1. These accessions provide researchers with a valuable resource for further studies on the genetic and functional characteristics of this strain, potentially leading to insights into its ecological interactions and contributions to soil microbiomes. Overall, Sphingopyxis macrogoltabida strain 203 exemplifies the complexity and functionality of soil bacteria, highlighting their essential roles in ecological processes such as organic matter degradation and soil nutrient dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis macrogoltabida
Strainstrain 203

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsoil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

NZ_CP009429.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4915 genes

Non-Coding Genes

208 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aaa family atpaseLH19_RS26930Not AvailablePositive103 - 130244167.9
parb/repb/spo0j family partition proteinLH19_RS26935Not AvailablePositive1299 - 231537564.0
replication initiator protein aLH19_RS26940Not AvailablePositive2494 - 374747151.2
wgr domain-containing proteinLH19_RS28270Not AvailablePositive4758 - 503910861.0
marr family transcriptional regulatorLH19_RS26945Not AvailableNegative5045 - 584528720.4
site-specific integraseLH19_RS26950Not AvailablePositive6161 - 717136584.8
3'-5' exonucleaseLH19_RS26955Not AvailablePositive7527 - 842633670.7
atp-dependent endonucleaseLH19_RS26960Not AvailablePositive8458 - 1059378548.4
uvrd-helicase domain-containing proteinLH19_RS26965Not AvailablePositive10595 - 1239466832.2
rna-directed dna polymeraseLH19_RS26970Not AvailablePositive12619 - 1501288954.5

Displaying genes 1 – 10 of 526 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.