Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | strain TSY216 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Mollusca, Mammalia |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Human |
Genome Summary
Vibrio cholerae strain TSY216 chromosome 2, complete sequence.
Gene Summary
Adenine Count
278172 bp
Thymine Count
278933 bp
Guanine Count
248510 bp
Cytosine Count
245669 bp
Genome Length
1051284 bp
Protein-coding Genes
992 genes
Non-Coding Genes
4 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycogen/starch/alpha-glucan phosphorylase | EN12_RS14225 | P00490 | Positive | 11883 - 14336 | 92570.8 |
| 4-alpha-glucanotransferase | EN12_RS14230 | P15977 | Positive | 14422 - 16602 | 81385.6 |
| 1,4-alpha-glucan branching protein glgb | EN12_RS14235 | Q9KNE8 | Positive | 16808 - 18997 | 84031.0 |
| type vi secretion system effector hcp-2 | EN12_RS14240 | Q9HI36 | Positive | 19392 - 19910 | 19060.3 |
| type vi secretion system vgr family protein | EN12_RS14245 | Q9KNE7 | Positive | 20038 - 22098 | 76374.7 |
| type vi secretion system accessory protein vasw | EN12_RS14250 | Q9KNE6 | Positive | 22098 - 22985 | 34215.6 |
| type vi secretion system toxin vasx | EN12_RS14255 | Q9KNE5 | Positive | 22982 - 26239 | 121049.0 |
| type vi secretion system immunity protein tsiv2 | EN12_RS14260 | Q9KNE4 | Positive | 26240 - 26968 | 27882.4 |
| mapeg family protein | EN12_RS14265 | P64515 | Positive | 27071 - 27472 | 14880.7 |
| acyltransferase | EN12_RS14270 | Q9X3P3 | Negative | 27645 - 28670 | 38927.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cholera | Causes | PMC10103850 |
| Ear infections | Causes | PMC10103850 |
| Wound infections | Causes | PMC10103850 |
| Septicaemia | Causes | PMC10103850 |
| Gastrointestinal infections | Causes | PMC10103850 |
| Necrotizing fasciitis | Causes | PMC10103850 |
| Vibriosis | Causes | PMC10472736 |
| Pneumonia | Causes | PMC12801787 |
| Gastroenteritis | Causes | PMC12801787 |
| Sinusitis | Causes | PMC12801787 |






