Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain CSF259-93 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
972036 bp
Thymine Count
986124 bp
Guanine Count
471775 bp
Cytosine Count
470800 bp
Genome Length
2900735 bp
Protein-coding Genes
2497 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is982 family transposase | FE46_RS04940 | Not Available | Positive | 1141344 - 1142546 | 46410.8 |
| t9ss type a sorting domain-containing protein | FE46_RS04945 | Not Available | Positive | 1142578 - 1144380 | 63972.4 |
| trna 2-thiouridine(34) synthase mnma | FE46_RS04950 | Not Available | Negative | 1144984 - 1146171 | 44497.2 |
| na+/h+ antiporter nhaa | FE46_RS04955 | Not Available | Negative | 1146229 - 1147383 | 41845.5 |
| chloride channel protein | FE46_RS04960 | Not Available | Positive | 1147515 - 1149335 | 66981.9 |
| is982 family transposase | FE46_RS04965 | Not Available | Positive | 1149562 - 1151218 | 64101.1 |
| aspartate aminotransferase family protein | FE46_RS04970 | Not Available | Positive | 1151275 - 1152471 | 44207.2 |
| tetratricopeptide repeat protein | FE46_RS04975 | Not Available | Positive | 1152735 - 1154129 | 55015.6 |
| shikimate dehydrogenase | FE46_RS04980 | Not Available | Positive | 1154283 - 1155020 | 27918.5 |
| 23s rrna (adenine(1618)-n(6))-methyltransferase rlmf | FE46_RS04985 | Not Available | Negative | 1155036 - 1155980 | 35613.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
