Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain CSF259-93 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
972036 bp
Thymine Count
986124 bp
Guanine Count
471775 bp
Cytosine Count
470800 bp
Genome Length
2900735 bp
Protein-coding Genes
2497 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sir2 family protein | FE46_RS04065 | Not Available | Negative | 950112 - 953201 | 119370.0 |
| tcr/tet family mfs transporter | FE46_RS04070 | Not Available | Negative | 953465 - 954700 | 45188.2 |
| is3 family transposase | FE46_RS04075 | Not Available | Negative | 954834 - 956218 | 54243.4 |
| hypothetical protein | FE46_RS04085 | Not Available | Negative | 956713 - 957129 | 16491.1 |
| ygcg family protein | FE46_RS04090 | Not Available | Negative | 957412 - 958212 | 28065.7 |
| tpm domain-containing protein | FE46_RS04095 | Not Available | Negative | 958212 - 958649 | 16212.3 |
| lema family protein | FE46_RS04100 | Not Available | Negative | 958728 - 959315 | 21768.9 |
| merr family transcriptional regulator | FE46_RS04105 | Not Available | Negative | 959364 - 959696 | 12960.9 |
| m23 family metallopeptidase | FE46_RS04110 | Not Available | Negative | 959696 - 960673 | 36625.8 |
| alanine--trna ligase | FE46_RS04115 | Not Available | Positive | 961004 - 963667 | 99451.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
