Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain CSF259-93 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
972036 bp
Thymine Count
986124 bp
Guanine Count
471775 bp
Cytosine Count
470800 bp
Genome Length
2900735 bp
Protein-coding Genes
2497 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asparagine synthase (glutamine-hydrolyzing) | FE46_RS03825 | Not Available | Positive | 893492 - 895339 | 71391.6 |
| udp-n-acetylmuramate dehydrogenase | FE46_RS03830 | Not Available | Positive | 895527 - 896540 | 37832.6 |
| abc transporter atp-binding protein | FE46_RS03835 | Not Available | Positive | 896558 - 897340 | 28973.3 |
| trna (cytidine(34)-2'-o)-methyltransferase | FE46_RS03840 | Not Available | Negative | 897360 - 897815 | 17443.9 |
| pseudouridine synthase | FE46_RS03845 | Not Available | Negative | 897822 - 898415 | 22621.6 |
| dna recombination protein rmuc | FE46_RS03850 | Not Available | Positive | 898507 - 899853 | 51096.5 |
| 6-phosphogluconate dehydrogenase | FE46_RS03855 | Not Available | Positive | 899861 - 900229 | 14280.5 |
| acyl-coa thioesterase | FE46_RS03860 | Not Available | Positive | 900230 - 900775 | 20093.3 |
| ion channel | FE46_RS03865 | Not Available | Negative | 900786 - 901742 | 36139.6 |
| carbamoyl-phosphate synthase large subunit | FE46_RS03870 | Not Available | Negative | 901803 - 904655 | 106087.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
