Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain CSF259-93 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
972036 bp
Thymine Count
986124 bp
Guanine Count
471775 bp
Cytosine Count
470800 bp
Genome Length
2900735 bp
Protein-coding Genes
2497 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yigz family protein | FE46_RS03675 | Not Available | Negative | 864518 - 865132 | 23552.2 |
| had family phosphatase | FE46_RS03680 | Not Available | Negative | 865209 - 865820 | 23814.9 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | FE46_RS03685 | Not Available | Negative | 865813 - 866820 | 37850.7 |
| gnat family n-acetyltransferase | FE46_RS03690 | Not Available | Positive | 866876 - 867370 | 18726.1 |
| peptide chain release factor n(5)-glutamine methyltransferase | FE46_RS03695 | Not Available | Positive | 867373 - 868230 | 33157.1 |
| abc transporter permease | FE46_RS03700 | Not Available | Negative | 868267 - 869508 | 45588.2 |
| histidine--trna ligase | FE46_RS03705 | Not Available | Positive | 869774 - 871192 | 52829.6 |
| site-specific tyrosine recombinase xerd | FE46_RS03710 | Not Available | Negative | 871289 - 872188 | 34525.6 |
| outer membrane beta-barrel protein | FE46_RS03715 | Not Available | Negative | 872278 - 872889 | 21299.3 |
| type ii 3-dehydroquinate dehydratase | FE46_RS03720 | Not Available | Positive | 873399 - 873812 | 15283.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
