Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain CSF259-93 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
972036 bp
Thymine Count
986124 bp
Guanine Count
471775 bp
Cytosine Count
470800 bp
Genome Length
2900735 bp
Protein-coding Genes
2497 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage holin family protein | FE46_RS03375 | Not Available | Positive | 804758 - 805102 | 12649.3 |
| trigger factor | FE46_RS03380 | Not Available | Positive | 805188 - 806513 | 49895.7 |
| atp-dependent clp endopeptidase proteolytic subunit clpp | FE46_RS03385 | Not Available | Positive | 806756 - 807457 | 26024.5 |
| atp-dependent clp protease atp-binding subunit clpx | FE46_RS03390 | Not Available | Positive | 807533 - 808765 | 45793.6 |
| twin-arginine translocase tata/tate family subunit | FE46_RS03395 | Not Available | Positive | 809013 - 809381 | 13317.0 |
| phosphatase pap2 family protein | FE46_RS03400 | Not Available | Positive | 809381 - 809944 | 21853.3 |
| o-methyltransferase | FE46_RS03405 | Not Available | Negative | 810008 - 810649 | 24485.9 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | FE46_RS03410 | Not Available | Positive | 810728 - 811771 | 39433.7 |
| hypothetical protein | FE46_RS03415 | Not Available | Negative | 811828 - 812709 | 31895.9 |
| polyprenyl synthetase family protein | FE46_RS03420 | Not Available | Positive | 812814 - 813791 | 37236.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
