Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain CSF259-93 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
972036 bp
Thymine Count
986124 bp
Guanine Count
471775 bp
Cytosine Count
470800 bp
Genome Length
2900735 bp
Protein-coding Genes
2497 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific integrase | FE46_RS03125 | Not Available | Negative | 745809 - 746852 | 40689.6 |
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | FE46_RS03130 | Not Available | Negative | 747209 - 748726 | 56286.3 |
| murein l,d-transpeptidase catalytic domain family protein | FE46_RS03135 | Not Available | Positive | 748967 - 749677 | 25727.3 |
| murein l,d-transpeptidase | FE46_RS03140 | Not Available | Negative | 749666 - 751366 | 66238.0 |
| gnat family n-acetyltransferase | FE46_RS03145 | Not Available | Negative | 751376 - 751807 | 16377.0 |
| Trna-gly | Not Available | Not Available | Positive | 752089 - 752161 | Not Available |
| dipeptidase pepe | FE46_RS03155 | Not Available | Negative | 752197 - 752904 | 26088.3 |
| hypothetical protein | FE46_RS03160 | Not Available | Positive | 753021 - 753740 | 27069.1 |
| duf6702 family protein | FE46_RS03165 | Not Available | Positive | 753832 - 754257 | 16311.9 |
| m1 family metallopeptidase | FE46_RS03170 | Not Available | Positive | 754316 - 756559 | 85741.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
