Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain CSF259-93 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
972036 bp
Thymine Count
986124 bp
Guanine Count
471775 bp
Cytosine Count
470800 bp
Genome Length
2900735 bp
Protein-coding Genes
2497 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uroporphyrinogen decarboxylase | FE46_RS00205 | Not Available | Negative | 60630 - 61655 | 38124.5 |
| uroporphyrinogen-iii synthase | FE46_RS00210 | Not Available | Negative | 61735 - 62397 | 24861.7 |
| hydroxymethylbilane synthase | FE46_RS00215 | Not Available | Negative | 62397 - 63323 | 34594.9 |
| glutamyl-trna reductase | FE46_RS00220 | Not Available | Negative | 63392 - 64633 | 46517.0 |
| helix-turn-helix transcriptional regulator | FE46_RS00225 | Not Available | Positive | 64863 - 65729 | 33375.2 |
| ferrochelatase | FE46_RS00230 | Not Available | Positive | 65733 - 66752 | 38478.8 |
| copd family protein | FE46_RS00235 | Not Available | Positive | 66785 - 67327 | 21709.2 |
| pas domain-containing sensor histidine kinase | FE46_RS00240 | Not Available | Positive | 67328 - 68803 | 56210.8 |
| enoyl-coa hydratase/isomerase family protein | FE46_RS00245 | Not Available | Positive | 68807 - 69589 | 27965.0 |
| hd domain-containing protein | FE46_RS00250 | Not Available | Negative | 69598 - 70245 | 24872.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
