Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain CSF259-93 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
972036 bp
Thymine Count
986124 bp
Guanine Count
471775 bp
Cytosine Count
470800 bp
Genome Length
2900735 bp
Protein-coding Genes
2497 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dinb family protein | FE46_RS01870 | Not Available | Positive | 447860 - 448315 | 17389.9 |
| cystathionine gamma-synthase | FE46_RS01875 | Not Available | Positive | 448504 - 449652 | 41911.4 |
| toxin-antitoxin system ywqk family antitoxin | FE46_RS01880 | Not Available | Negative | 449753 - 450103 | 13549.2 |
| hypothetical protein | FE46_RS01885 | Not Available | Negative | 450312 - 451523 | 42161.8 |
| tonb-dependent receptor | FE46_RS01890 | Not Available | Negative | 451713 - 454547 | 106082.0 |
| response regulator transcription factor | FE46_RS01895 | Not Available | Positive | 454728 - 455414 | 26156.0 |
| cell wall metabolism sensor histidine kinase walk | FE46_RS01900 | Not Available | Positive | 455415 - 456479 | 40745.7 |
| porin | FE46_RS01905 | Not Available | Positive | 456600 - 457937 | 50336.7 |
| phosphate abc transporter substrate-binding protein | FE46_RS01910 | Not Available | Positive | 457957 - 458790 | 29803.9 |
| phosphate abc transporter permease subunit pstc | FE46_RS01915 | Not Available | Positive | 458881 - 460032 | 41536.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
