Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain CSF259-93 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
972036 bp
Thymine Count
986124 bp
Guanine Count
471775 bp
Cytosine Count
470800 bp
Genome Length
2900735 bp
Protein-coding Genes
2497 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| geranylgeranylglycerol-phosphate geranylgeranyltransferase | FE46_RS01665 | Not Available | Positive | 395225 - 396142 | 35417.8 |
| pseudouridine synthase | FE46_RS01670 | Not Available | Positive | 396283 - 397191 | 33832.9 |
| nuclear transport factor 2 family protein | FE46_RS01675 | Not Available | Positive | 397301 - 397663 | 14030.8 |
| helix-turn-helix transcriptional regulator | FE46_RS01680 | Not Available | Negative | 398082 - 398426 | 13492.4 |
| hypothetical protein | FE46_RS01685 | Not Available | Positive | 398511 - 398708 | 7379.97 |
| calx-beta domain-containing protein | FE46_RS12935 | Not Available | Positive | 399067 - 408045 | 302769.0 |
| type ix secretion system membrane protein porp/sprf | FE46_RS01700 | Not Available | Positive | 408097 - 409011 | 34217.9 |
| ompa family protein | FE46_RS01705 | Not Available | Positive | 409022 - 410956 | 72521.6 |
| is982 family transposase | FE46_RS01710 | Not Available | Negative | 411000 - 411855 | 33532.2 |
| class ii fructose-bisphosphate aldolase | FE46_RS01715 | Not Available | Negative | 411917 - 412984 | 38920.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
