Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | strain CSF259-93 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
972036 bp
Thymine Count
986124 bp
Guanine Count
471775 bp
Cytosine Count
470800 bp
Genome Length
2900735 bp
Protein-coding Genes
2497 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate--trna ligase | FE46_RS01460 | Not Available | Positive | 344404 - 346155 | 66456.5 |
| cold-shock protein | FE46_RS01465 | Not Available | Positive | 346260 - 346460 | 7312.51 |
| nucleoside deaminase | FE46_RS01470 | Not Available | Negative | 346606 - 347046 | 16430.0 |
| hypothetical protein | FE46_RS01475 | Not Available | Positive | 347109 - 347696 | 22015.6 |
| 1-deoxy-d-xylulose-5-phosphate synthase | FE46_RS01480 | Not Available | Positive | 347743 - 349515 | 65000.8 |
| t9ss-dependent m36 family metallopeptidase | FE46_RS01485 | Not Available | Negative | 349567 - 352311 | 99919.2 |
| m36 family metallopeptidase | FE46_RS01490 | Not Available | Negative | 352903 - 354291 | 49486.2 |
| is982 family transposase | FE46_RS01495 | Not Available | Negative | 354295 - 355188 | 34445.2 |
| m36 family metallopeptidase | FE46_RS01500 | Not Available | Negative | 355287 - 356681 | 51248.4 |
| deoxyguanosinetriphosphate triphosphohydrolase | FE46_RS01505 | Not Available | Negative | 356767 - 358110 | 50764.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
